PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001459.1_g150.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ARR-B

Protein Properties

Length: 483aa MW: 54666.4 Da PI: 4.5261

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001459.1_g150.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	24.1	7.9e-08	166	189	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k r++Wt+eLH +Fv +v++LG ++ Cse_sc001459.1_g150.1 166 KHRMVWTQELHYQFVVVVKHLG-IQ 189 68*******************5.44 PP
2	G2-like	69.3	6.3e-22	278	329	1	53
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k r++Wt+eLH +Fv +v++L G+++A+Pk+ilelm+v+gL ++ v+SHLQ + Cse_sc001459.1_g150.1 278 KHRMVWTQELHYQFVVVVKHL-GIQNAVPKKILELMNVPGLRRARVASHLQVF 329 68*****************.9**************************87 PP
3	Myb_DNA-binding	26.2	1.9e-08	280	329	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r+ WT+e++ ++v +vk lG +k+I + m+ g+ + + s++q + Cse_sc001459.1_g150.1 280 RMVWTQELHYQFVVVVKHLGIQnaVPKKILELMNvPGLRRARVASHLQVF 329 789****************999*******9999999***976 PP
4	Response_reg	33.7	1.9e-12	24	99	1	75
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpii 75 vl+vd +p+ + l+++l++ +y +v++++ + eal+l+k+ + +D++++ ++ + ++G+e+l+ i +e +lp++ Cse_sc001459.1_g150.1 24 VLVVDNDPDSLLYLTEMLTSCQY-QVTTCSLPAEALQLIKDDNkkFDIVITEVQFSPdINGVEFLEIIVRET-RLPVV 99 89*******************.***********776666*****7544********6655.45555 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MSSSENSLME PLSIEDFNPH GLKVLVVDND PDSLLYLTEM LTSCQYQVTT CSLPAEALQL 60 IKDDNKKFDI VITEVQFSPD INGVEFLEII VRETRLPVVK VQFSPDINGV EFLEIIVRET 120 RLPVVNKLEI NEPSSCTSVE DKELCGSSDS DGVQTDDDQT KDQSKKHRMV WTQELHYQFV 180 VVVKHLGIQN DSIDTITECI LKGACICIPK PAKKEVIKPI WQHVARRLLR HNLMKXIDKL 240 EINEPSSCTS VEDKELCGSS DSDGVQTDDD QTKDQAKKHR MVWTQELHYQ FVVVVKHLGI 300 QNAVPKKILE LMNVPGLRRA RVASHLQVFE DNNSFISTQL ITGVQQCFTE QDSNCHVPIG 360 ANSQVMENNN LFIRNSPITE LQQHFTVQDS SIQVPSGANS HMMENNDLFI RNSPITELQQ 420 NYTVQDSSTE VPSGAFHPVI EKEDWEKDWF VGIPPITDAE LQTLESELDN HFSFSMTQNT 480 PSN

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MSSSENSLME PLSIEDFNPH GLKVLVVDND PDSLLYLTEM LTSCQYQVTT CSLPAEALQL  60
IKDDNKKFDI VITEVQFSPD INGVEFLEII VRETRLPVVK VQFSPDINGV EFLEIIVRET  120
RLPVVNKLEI NEPSSCTSVE DKELCGSSDS DGVQTDDDQT KDQSKKHRMV WTQELHYQFV  180
VVVKHLGIQN DSIDTITECI LKGACICIPK PAKKEVIKPI WQHVARRLLR HNLMKXIDKL  240
EINEPSSCTS VEDKELCGSS DSDGVQTDDD QTKDQAKKHR MVWTQELHYQ FVVVVKHLGI  300
QNAVPKKILE LMNVPGLRRA RVASHLQVFE DNNSFISTQL ITGVQQCFTE QDSNCHVPIG  360
ANSQVMENNN LFIRNSPITE LQQHFTVQDS SIQVPSGANS HMMENNDLFI RNSPITELQQ  420
NYTVQDSSTE VPSGAFHPVI EKEDWEKDWF VGIPPITDAE LQTLESELDN HFSFSMTQNT  480
PSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	1e-18	ARR-B family protein