PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001488.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 376aa MW: 43736.2 Da PI: 5.0566

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001488.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	31.2	5.8e-10	37	78	2	43
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHH CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpk 43 Fl+k+++++ed++ +e++sws++ nsfvv+d+ +f++++Lp+ Cse_sc001488.1_g050.1 37 FLRKIFDMVEDPTSDEVVSWSKTRNSFVVWDSCRFSTSLLPN 78 9*************************************9986 PP
2	HSF_DNA-bind	42.3	2e-13	79	180	16	102
TTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHH........................HHHHH.HTTEEE---SSBTTTTXTTS CS HSF_DNA-bind 16 keliswsengnsfvvldeeefakkvLpkyFkhsnfaSF........................vRQLn.mYgFkkvkdeekkskskeki 78 +e++sws++ nsfvv+d+ +f++++LpkyFkh ++S+ +++++ YgFkkv+ + Cse_sc001488.1_g050.1 79 DEVVSWSKTRNSFVVWDSYRFSTSLLPKYFKHI-YESLrrrtesqwivaanhkilmfavfssMKKMKgSYGFKKVDPD---------R 156 789**************************95.89997888888888887555555555554444434555555555.........5 PP EEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 79 weFkhksFkkgkkellekikrkks 102 weF+++ F g+++ll++i+r+++ Cse_sc001488.1_g050.1 157 WEFANEGFLGGQRHLLKTIRRRRN 180 *******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MQTMKEEEVT FISSSSSSSS SSPRPREGLN EVGPPPFLRK IFDMVEDPTS DEVVSWSKTR 60 NSFVVWDSCR FSTSLLPNDE VVSWSKTRNS FVVWDSYRFS TSLLPKYFKH IYESLRRRTE 120 SQWIVAANHK ILMFAVFSSM KKMKGSYGFK KVDPDRWEFA NEGFLGGQRH LLKTIRRRRN 180 VAQSVLPKQE YDPCIEVGQY GIEEELEGLK RERSVLMADI VRLRQLQQHS QDQLISIENR 240 LKATDRKQQN MMGFLAKAFS NPKFLQKYID KNANKEQKHI EIGRKRRLTM TPSVENLPEN 300 IDPFITAPFE EESSSNVGLV EDESHDNLWE ELLNVDLPTE VPPDDFLDDL DGQQLDWDED 360 VQELVDQMEY LRSSNA

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MQTMKEEEVT FISSSSSSSS SSPRPREGLN EVGPPPFLRK IFDMVEDPTS DEVVSWSKTR  60
NSFVVWDSCR FSTSLLPNDE VVSWSKTRNS FVVWDSYRFS TSLLPKYFKH IYESLRRRTE  120
SQWIVAANHK ILMFAVFSSM KKMKGSYGFK KVDPDRWEFA NEGFLGGQRH LLKTIRRRRN  180
VAQSVLPKQE YDPCIEVGQY GIEEELEGLK RERSVLMADI VRLRQLQQHS QDQLISIENR  240
LKATDRKQQN MMGFLAKAFS NPKFLQKYID KNANKEQKHI EIGRKRRLTM TPSVENLPEN  300
IDPFITAPFE EESSSNVGLV EDESHDNLWE ELLNVDLPTE VPPDDFLDDL DGQQLDWDED  360
VQELVDQMEY LRSSNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-82	HSF family protein