PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001488.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 315aa    MW: 36482.8 Da    PI: 4.6077
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001488.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind72.96.3e-23381222102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+++++ed++ +e++sws++ nsfvv+d+ +f++++LpkyFkhsnf+SF       gFkkv+ ++         weF+++ F  g
  Cse_sc001488.1_g080.1  38 FLRKIFDMVEDPTSDEVVSWSKTRNSFVVWDSYRFSTSLLPKYFKHSNFSSF-------GFKKVDPDR---------WEFANEGFLGG 109
                            9**************************************************9.......9*****999.........*********** PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +++ll++i+r+++
  Cse_sc001488.1_g080.1 110 QRHLLKTIRRRRN 122
                            **********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MQTVKEEEEV TFISSSSSSS SSSPRPREGL NEVGPPPFLR KIFDMVEDPT SDEVVSWSKT  60
RNSFVVWDSY RFSTSLLPKY FKHSNFSSFG FKKVDPDRWE FANEGFLGGQ RHLLKTIRRR  120
RNVAQSVLPK QEYDPCIEVG QNGIEEELEG LKRERSVLMA EIVRLKQHSK DQLISIENRL  180
KATERKQQNM MGFLAKAFSN PEFLQKYIDK NANKEQKHIE IGRKRRLTMT PSVENLPENI  240
DPFITAPFEE ESSSNVGLVE DESHDNLWEE LLNIVLPTEV PPDDFLDDLD GQQLDWDEDM  300
QELVDQMEYL RSSNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-91HSF family protein