PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001497.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 475aa MW: 52384.8 Da PI: 9.9727

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001497.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.6	4.1e-20	112	161	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +grW AeIrd r r++lg+f+taeeAa+a++aa+++l+g Cse_sc001497.1_g020.1 112 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 161 69*****.******32....25***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MNTLFQTLPF LPSNTNSCDQ LVNPFSLLDQ FPQFYCNNSS FQAHYFAPAN PSLETNDHPA 60 VLEGIGAVVG ERVLYGNPVT TIVQRESTMV KDVGREMKFQ SVKNVTSTAV KSYRGVRKRP 120 WGRWSAEIRD RIGRCRHWLG TFDTAEEAAR AYDAAARRLR GSKARTNFKI PSVFPLSNTA 180 TSPTTSSTSS TEAKKRKSRK CSSNTNYNKC HAVTSVDQLF SNGSMTMRIN PSTSTSQVTS 240 NNNNDVELDL YVGGTLTKRA KTLSNGRQTG NKLCRAPHAQ DFLTVILIKG LGQHMSALEY 300 RTILKYRLMI PLFPADEPCP VCRKVCLDSF GEHAVHCKEL PDPLEGRSTL RPADILVFGW 360 AGGKHACVDL TGVSLLDNEF VAGQAAVKAE SSKVAKHEKA CLENQHVFTP FAFDTFGFLA 420 SAAVEFLTRV QRVVQSNFAT PKSQNFIFSR IGFAIQKGVA AQLVARLPAI LLTVK

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MNTLFQTLPF LPSNTNSCDQ LVNPFSLLDQ FPQFYCNNSS FQAHYFAPAN PSLETNDHPA  60
VLEGIGAVVG ERVLYGNPVT TIVQRESTMV KDVGREMKFQ SVKNVTSTAV KSYRGVRKRP  120
WGRWSAEIRD RIGRCRHWLG TFDTAEEAAR AYDAAARRLR GSKARTNFKI PSVFPLSNTA  180
TSPTTSSTSS TEAKKRKSRK CSSNTNYNKC HAVTSVDQLF SNGSMTMRIN PSTSTSQVTS  240
NNNNDVELDL YVGGTLTKRA KTLSNGRQTG NKLCRAPHAQ DFLTVILIKG LGQHMSALEY  300
RTILKYRLMI PLFPADEPCP VCRKVCLDSF GEHAVHCKEL PDPLEGRSTL RPADILVFGW  360
AGGKHACVDL TGVSLLDNEF VAGQAAVKAE SSKVAKHEKA CLENQHVFTP FAFDTFGFLA  420
SAAVEFLTRV QRVVQSNFAT PKSQNFIFSR IGFAIQKGVA AQLVARLPAI LLTVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80580.1	1e-29	ERF family protein