PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001524.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 146aa    MW: 16603 Da    PI: 5.7055
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001524.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS179.13.2e-552145231374
                   GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
                            +++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a+++++s +r+kvE+ +++++i+n+vacegaer++rhe+lekWr+ 
  Cse_sc001524.1_g020.1   2 IRDQAPNIVTIVEQEASHNEPYFLGRFLEALHYYSAIFDSLDATFAADSAQRAKVEQYIFAPDIRNIVACEGAERVMRHERLEKWRKI 89 
                            78889*********************************************************************************** PP

                   GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                            +e  GFk v+lse+a++q k l+  ++ dgyr+ e++g l+lgW+d +L+++SaWr
  Cse_sc001524.1_g020.1  90 MEGKGFKGVALSENAVTQSKILMILYSCDGYRLTEDKGPLLLGWQDISLLAASAWR 145
                            *******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MIRDQAPNIV TIVEQEASHN EPYFLGRFLE ALHYYSAIFD SLDATFAADS AQRAKVEQYI  60
FAPDIRNIVA CEGAERVMRH ERLEKWRKIM EGKGFKGVAL SENAVTQSKI LMILYSCDGY  120
RLTEDKGPLL LGWQDISLLA ASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-42GRAS family protein