PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001620.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 208aa    MW: 22776.2 Da    PI: 10.6751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001620.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.8e-1667115254
                    AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                            +++GVr +k +g+W +eIrd + +   +kr++lg+f tae+Aak + a ++++e
  Cse_sc001620.1_g030.1  67 RIPGVRMRK-WGKWCSEIRDpF-I---KKRVWLGTFNTAEDAAKVYYAKKEEFE 115
                            789****99.**********44.2...5******************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MPTERKNKYP KKVRVILSDP DATDSSSDES SVTDRSSGKK VVREVVLGVK AGNKEVKVGQ  60
KEPQMKRIPG VRMRKWGKWC SEIRDPFIKK RVWLGTFNTA EDAAKVYYAK KEEFEARKLA  120
EASGSGKVRV GNGGDGKKVV GSSGPGGSVH DPTQGPRVVN IRGPVDVLKL EFETSKACEV  180
KKVESGLKRV RPVGFGNGVT FKTPKFEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.14e-17ERF family protein