PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001671.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 262aa    MW: 30261.1 Da    PI: 8.7888
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001671.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.5e-106484890
                   FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           +ek++r+r + r+gC ak++++k ++  +ev+ +++ HnH+l+
  Cse_sc001671.1_g040.1  6 KEKKKRNRGSFRCGCLAKIRIRKIEEIFYEVYAFVEGHNHPLV 48
                           468999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDEHVKEKKK RNRGSFRCGC LAKIRIRKIE EIFYEVYAFV EGHNHPLVAE KDMIIMKSSK  60
DLTYTKQHFL FQASNANFGP STGFNLLKQM CGGFDRVGAI VVDCKNQKKK INLFIGDDDK  120
LVGLFWADEQ AIKDYAIFGD IISFDATFRS NKHKMVFVPF TGINHHNRCI TFASGLLFDE  180
TVGAYKWLLD EFKNEFGKDS NVVMTDQDLS MKIAIPECFP NTRHRLCMWH IMQKLTTKVG  240
TAICSKTDFK RRICDIVWTD QI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-41FAR1 family protein