PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001687.1_g020.2

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 752aa MW: 82893.1 Da PI: 5.6272

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001687.1_g020.2	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.9	1.3e-14	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT++E+ +++a k++G W +I +++g ++t+ q++s+ qk+ Cse_sc001687.1_g020.2 90 RERWTEDEHNSFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 134 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MLTIGFDIFG LVYGEFVERF SRVSARFGED SFLVVPYQVL LNKATAKLVS CVDATRNERR 60 LLYHLLMDSY SSGEIHNIKT RKPYTITKQR ERWTEDEHNS FLEALKLYGR AWQRIEEHIG 120 TKTAVQIRSH AQKFFTKLEK EAVAKGVPIK QALDIEIPPP RPKRKPNYPY PRKTGPKDPQ 180 VAEKDGKQET LISSLQSGIQ ILDLEKKTLP QTTCHEEELE NETNDELGTG TEGPSLSHEG 240 PCASSDNENS APQAFKEFIP VLEKPINQDD TNGSFITIET RKHQKLDKDG INYTTITSNT 300 SLYEGQYPDK LSQPVLSLND IRGVQNYPRH VPVQVIDGNQ GKDTVPTEMS FLESTLTKSG 360 EVHETVNIAA SATTSEHQNN ASSYPTFHPL FTPFSNNQEN HRSFLHVSST VSSLIVSSLL 420 QNPAAHAAAS FAATFWHPEA SSGDSLSRDH PEPPSMAAIA AATVAAATAW WAAHGLLPVC 480 TPFYPGYSTS PYSCGTPIDA NQERVANNGT SEVVLQEKKT EAEKTQGLPK GSPDQSSSDD 540 TESKLNTELS PDDTAPVAEV HDSTKTNVRK QVDRSSCGSN TTSSSEIETD ALEKHGKEKE 600 ETKVSDVNLS CNDTMFRRSR GIINPNESWK EVSEEGRIAF QALFSREVLP QSFPAAQKNG 660 EGVSQLDLNR TSQEAGESNG FAVLKGDTNM EEGVLKMGLG SVKLNVHHTG FKPYKRCSIE 720 AKESEIVTAS AGSSQNDEKC PKRMRLEAEA ST

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MLTIGFDIFG LVYGEFVERF SRVSARFGED SFLVVPYQVL LNKATAKLVS CVDATRNERR  60
LLYHLLMDSY SSGEIHNIKT RKPYTITKQR ERWTEDEHNS FLEALKLYGR AWQRIEEHIG  120
TKTAVQIRSH AQKFFTKLEK EAVAKGVPIK QALDIEIPPP RPKRKPNYPY PRKTGPKDPQ  180
VAEKDGKQET LISSLQSGIQ ILDLEKKTLP QTTCHEEELE NETNDELGTG TEGPSLSHEG  240
PCASSDNENS APQAFKEFIP VLEKPINQDD TNGSFITIET RKHQKLDKDG INYTTITSNT  300
SLYEGQYPDK LSQPVLSLND IRGVQNYPRH VPVQVIDGNQ GKDTVPTEMS FLESTLTKSG  360
EVHETVNIAA SATTSEHQNN ASSYPTFHPL FTPFSNNQEN HRSFLHVSST VSSLIVSSLL  420
QNPAAHAAAS FAATFWHPEA SSGDSLSRDH PEPPSMAAIA AATVAAATAW WAAHGLLPVC  480
TPFYPGYSTS PYSCGTPIDA NQERVANNGT SEVVLQEKKT EAEKTQGLPK GSPDQSSSDD  540
TESKLNTELS PDDTAPVAEV HDSTKTNVRK QVDRSSCGSN TTSSSEIETD ALEKHGKEKE  600
ETKVSDVNLS CNDTMFRRSR GIINPNESWK EVSEEGRIAF QALFSREVLP QSFPAAQKNG  660
EGVSQLDLNR TSQEAGESNG FAVLKGDTNM EEGVLKMGLG SVKLNVHHTG FKPYKRCSIE  720
AKESEIVTAS AGSSQNDEKC PKRMRLEAEA ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-89	MYB_related family protein