PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001697.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 339aa    MW: 37160.9 Da    PI: 6.3111
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001697.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.3e-17247280134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            C +C  tkTp+WR gp g+k+LCnaCG++y++ +
  Cse_sc001697.1_g070.1 247 CMHCEITKTPQWRAGPMGPKSLCNACGVRYKSGR 280
                            99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MSTQTFVDEI DCGSFFDHID DFIDFPPVTD ASLDSIECND FNDIWGNNSD ELKVADNVFI  60
GSHSASAMSQ ELHVPLEDIV QLEWLSNFVE DSFSGGGMTM NKENIPVKKE SLMVPNYQFQ  120
MSSPVSVLES SSSSSSSSSS SGSGGKMIPL SPTHRGPQRA RSKRPRPPAF NPRAAIELLS  180
PSTLVTVPVS LASDSFIESH SGPKFGGVGD DQKKRKKKAK KPDAPFNPEN QNENQIQNQT  240
GQGVRKCMHC EITKTPQWRA GPMGPKSLCN ACGVRYKSGR LFPEYRPAAS PTFIPTVHSN  300
SHKKVVEMRT KCLPNDIMLA LPEPEPALIP NMNPPADYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163167KRPRP
2213217KKRKK
3213221KKRKKKAKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.29e-40GATA family protein