PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001707.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 275aa    MW: 30847.5 Da    PI: 5.0359
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001707.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49.1e-102651126
                           TSSS-HHHHHHHHHHHHHTTTT-HHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWkt 26
                           +g+WT+eEd+llvd++++ G gtW++
  Cse_sc001707.1_g050.1 26 KGAWTPEEDKLLVDYITKNGHGTWRS 51
                           79**********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MRKRGFQKKK KGMGRAPCCV KGEVKKGAWT PEEDKLLVDY ITKNGHGTWR SFPQLAVRKL  60
DGSLDVKPDF EDVEKAVDFV GLTISLPGRT DNEIKNFWNS HLRKRIPNKN GTLPANPPSK  120
STEKKSTLPP TRQVADLEDA REEEKPEAMD PALSSPATVI SDSDNFLNDW GSSDGETFQK  180
HMDFEKVQCE IPAPRAIKFE PDSYTVHTGP HIPVTSTSES CNQGFKEHIR LKVEAEEITH  240
AAESQSLYEA ENDASDITLD LLIDFPNDGE YLEYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-36MYB family protein