PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001712.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 197aa MW: 20621.7 Da PI: 6.8038

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001712.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	54.9	3.7e-17	7	75	36	89
TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg................k 89 +eLG+++d++tieWLl+qa+p+i+++tgt+++++ ++ + + s++n s++ Cse_sc001712.1_g070.1 7 IRELGHKSDGQTIEWLLRQAEPSIIAATGTGTPASFST-VSVAVRSNNNTSITatldqkaappvshhhhM 75 59****************************99999555.2222222222333323322222222222220 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MPRGTLIREL GHKSDGQTIE WLLRQAEPSI IAATGTGTPA SFSTVSVAVR SNNNTSITAT 60 LDQKAAPPVS HHHHMLSPAP FLLGKRSRSD DEIDKDDGQS GNHMGQAVAV SGGGVGGGGG 120 FWALPARSDF GQVRSFAAAP QDMNSMAAAQ QQGRFYQQQQ QQVQAMGEAS AARVGNYLPI 180 TQGPPQQSSG GGKDDNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	6e-44	TCP family protein