PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001738.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 469aa MW: 53134.7 Da PI: 6.2118

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001738.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00014	10	32	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k +++ +L H+r+H Cse_sc001738.1_g040.1 10 FVCKLCDKKYPSGKSLGGHMRSH 32 89********************9 PP
2	zf-C2H2	11.2	0.0012	413	435	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++F++ L H r+H Cse_sc001738.1_g040.1 413 HECPICFRMFKSGQALGGHKRSH 435 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEEEHDELRF VCKLCDKKYP SGKSLGGHMR SHVLAASNSY ESDEMFSSLM MNGSGSGSGI 60 ENGNPSTYGL RENPKKTWRA VGSSSTFSFP NERICKQCGK GFQSLKALCG HMACHSEKDR 120 SFKDYDHSWT SENLDHEEKI VIDSHSDTEE GDEAEEGEFE DPTRVTRSKT TQRYKKIVIK 180 PYTLNTTSNN SNYNYGSSSV TEIDEFEQEE VAMCLMMLSK DTNYWGGVNS VVESSDNNSA 240 VLETKSSSIE MKFSKKSVDG EYNQFENSNN GHYKKVDSDI SVEELLRNGK SIGVFDNARE 300 LTYEEKLEVR RNLFREFGYR DSLNKRIRDD DDAYTPDLER EGSHKKKNKY ECLNCNKVFT 360 TFQGLGGHRP CNKKNNAFVS RHDSGENSLE GDFAPNRKPK YDKKMKAKKS KGHECPICFR 420 MFKSGQALGG HKRSHFLNGS IDHYAAAMER EAPSCSDMID LNLPAPEED

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEEEHDELRF VCKLCDKKYP SGKSLGGHMR SHVLAASNSY ESDEMFSSLM MNGSGSGSGI  60
ENGNPSTYGL RENPKKTWRA VGSSSTFSFP NERICKQCGK GFQSLKALCG HMACHSEKDR  120
SFKDYDHSWT SENLDHEEKI VIDSHSDTEE GDEAEEGEFE DPTRVTRSKT TQRYKKIVIK  180
PYTLNTTSNN SNYNYGSSSV TEIDEFEQEE VAMCLMMLSK DTNYWGGVNS VVESSDNNSA  240
VLETKSSSIE MKFSKKSVDG EYNQFENSNN GHYKKVDSDI SVEELLRNGK SIGVFDNARE  300
LTYEEKLEVR RNLFREFGYR DSLNKRIRDD DDAYTPDLER EGSHKKKNKY ECLNCNKVFT  360
TFQGLGGHRP CNKKNNAFVS RHDSGENSLE GDFAPNRKPK YDKKMKAKKS KGHECPICFR  420
MFKSGQALGG HKRSHFLNGS IDHYAAAMER EAPSCSDMID LNLPAPEED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	5e-56	C2H2 family protein