PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001743.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 331aa    MW: 36403.4 Da    PI: 6.505
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001743.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.82.8e-344296155
                G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl
  Cse_sc001743.1_g090.1 42 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 96
                           79****************************************************8 PP
2Myb_DNA-binding77.81.4e-244495148
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                           r+rWT+e++e++vdav+qlGg+   t+ktI+rtmg kg+tl+++ks++qky+
  Cse_sc001743.1_g090.1 44 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 95
                           89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MYSGIHSISL DGSNLGHGEY PGQIDGSGFV GDPCLVLTTD PKPRLRWTAE LHERFVDAVT  60
QLGGPDKATP KTIMRTMGVK GLTLYHLKSH LQKYRLGKQS CKEFTENSKD GNDLTNSDVY  120
HLLALPHTKF ASCIAESQDT GSSTTSSTRM MPQDSNEYVF FEVIYNKHIN ICDCIITLLT  180
LLIASSNSGF QVTEALRVQM EVQRRLHEQL EVQRRLQLRI EAQGKYLQSI LEKACKALND  240
QAVATAGLDA AREELSELAI KVANDCPQSV IPIPSLPDVA AYLENGIAPS IDSCLTSNSN  300
PVSPMGMKKR HRAMFSNGGD SLPQAEWMMS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-114G2-like family protein