PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001783.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 209aa    MW: 23307.3 Da    PI: 6.6223
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001783.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.83.5e-1562113155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr + k  +Wv+e+r+p     +  r++lg++  ae+Aa+a++ a ++++g
  Cse_sc001783.1_g060.1  62 PVYRGVRSRDKGRKWVCEVRHPI----TqSRVWLGTHPNAEMAARAHDVAVLAMRG 113
                            68****99998999*******72....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDMYASNKSY NSFPSTSSST ETPLTCTDGS GSFSSELEVL MLASENPKKR AGRKKCKETR  60
HPVYRGVRSR DKGRKWVCEV RHPITQSRVW LGTHPNAEMA ARAHDVAVLA MRGPKHACLN  120
FADSVWRLPV PESNHVADIQ KAAAEAAEAF RHTKPEVAMD YYMNEDELPG FLDSMAEALM  180
LPPPQSFVGY GSNIFDDVES CADMSLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-54ERF family protein