PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001804.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 247aa MW: 26491.7 Da PI: 9.2623

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001804.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++sF++ L H r+H Cse_sc001804.1_g040.1 154 HECSICHRSFPTGQALGGHKRRH 176 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MAVEALNSPT TATTPLFRQE SMKYLESWTK GKRSKRPRVE QPPSEEEYLA FCLMLLARGG 60 RSDDISGAFT KTAEAPLKSN VAVAPKQQAQ LQHQHFVHKC TVCDKTFGSY QALGGHKASH 120 RKNNPGAEIE HSAAATTTSS ASGTHGGVGS GRSHECSICH RSFPTGQALG GHKRRHYEGV 180 IGGGKAASGI TSSEGVGSTN SQRGFDLNLP AMPEFISGFA EEEVESPHPA KRSRLFPGIK 240 LEIPTQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	4e-57	C2H2 family protein