PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001804.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 169aa    MW: 18354.8 Da    PI: 4.69
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001804.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26087.32e-272104197
                 DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilk 82 
                            +C++C+vlr++C  dCvl+p++     p++q +++ ++ k+FG+s ++++++a+p ++ r ++++sl+yeA  r+ +Pv+Ga+g++++
  Cse_sc001804.1_g060.1   2 SCNGCRVLRKGCGVDCVLRPCLewiqsPDAQGHATLFLSKFFGRSDLVNFISAVPSNQqRAALFQSLLYEAVGRTVNPVNGAMGLLST 89 
                            6*************************999*************************776659**************************** PP

                 DUF260  83 lqqqleqlkaelall 97 
                            ++++l+++ ++++l+
  Cse_sc001804.1_g060.1  90 GNWHLCEVGVQTVLA 104
                            ******998887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MSCNGCRVLR KGCGVDCVLR PCLEWIQSPD AQGHATLFLS KFFGRSDLVN FISAVPSNQQ  60
RAALFQSLLY EAVGRTVNPV NGAMGLLSTG NWHLCEVGVQ TVLAGGSPAP LGDETWIQEV  120
DESSEVFQDK GAWAMMMIQN QADPSSSNAT RQENVTTSCD EPKLLNLFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.15e-55LBD family protein