PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001827.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 247aa    MW: 27083.9 Da    PI: 7.7115
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001827.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.41.4e-323185459
            ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                           +rY+eClkNhA+s+GghavDGCgEfm++ g++gt +alkCaAC+CHRnFHR+e+++
  Cse_sc001827.1_g030.1 31 YRYRECLKNHAVSIGGHAVDGCGEFMAA-GDDGTLDALKCAACNCHRNFHRKESTT 85
                           79*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEFDEHDQEQ EDHMSIHHQP VRKITGGGGG YRYRECLKNH AVSIGGHAVD GCGEFMAAGD  60
DGTLDALKCA ACNCHRNFHR KESTTSTFSS ADGLSLHQTN RQQQPHPHHY LPPPPGYYHR  120
PSTGYLNMTS APTSFRPLPL ALPSTSRDDL DEISNPSSSG GGGNGHGNGG SGSGSKKRFR  180
TKFTSDQKDR MLAFAETLGW KIQKQDEGAV QQFCTETGVK RHVLKVWMHN NKHTIGGLIG  240
DRGLEFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-57ZF-HD family protein