PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001856.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family BBR-BPC
Protein Properties Length: 164aa    MW: 18416.2 Da    PI: 9.632
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001856.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind142.77.2e-4478149217288
              GAGA_bind 217 GalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdh 288
                            G+++ CY+WG+GGWqSaCCtttiS yPLP+stkrrgaRiagrKmSqgafkk+Lek+a+e y+++ +++L+ h
  Cse_sc001856.1_g070.1  78 GVQQLCYRWGSGGWQSACCTTTISLYPLPMSTKRRGARIAGRKMSQGAFKKVLEKVASESYNFASAINLRLH 149
                            899******************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MSSSLDAAGE PIPTSMVSIS GIEKHSEFYP IAKQSRMTKF FFRVHSVIGS MYNFMDDDGL  60
NIRNWGYYEP PSFKEHLGVQ QLCYRWGSGG WQSACCTTTI SLYPLPMSTK RRGARIAGRK  120
MSQGAFKKVL EKVASESYNF ASAINLRLHL NMALTSLTPW PCLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.14e-37BBR-BPC family protein