PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001867.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 193aa    MW: 21799.1 Da    PI: 8.9679
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001867.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.86.6e-32109164158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            +ep++VNaKQy++Il+RRq Rak+e+e+kl  ksrkpylheSRh hAlrR+Rg+gGrF
  Cse_sc001867.1_g010.1 109 EEPVFVNAKQYHGILRRRQCRAKAESENKL--KSRKPYLHESRHLHALRRNRGCGGRF 164
                            69****************************..*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSSSAPEYSD NSESENQQSQ MDSQNQSSPP ATGMSHPYVS TSNIQYPTQL GANALGQAFP  60
YPDPYYRSMF IPHETQPYPT QPYPVQPMVH LQLMGAQPGG VPLPSDTIEE PVFVNAKQYH  120
GILRRRQCRA KAESENKLKS RKPYLHESRH LHALRRNRGC GGRFQKKDKQ QKEISSDDNS  180
QSHVNINLNS DKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-49NF-YA family protein