PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001874.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 170aa    MW: 18927.7 Da    PI: 7.07
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001874.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.71.5e-06143163425
                            ---SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                            ++C ++++ G C +G++CkF H
  Cse_sc001874.1_g050.1 143 KPCLNWSK-GSCCFGASCKFLH 163
                            79******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MTVIDPPPQP SILLSNKLMA ITNLNNIIPV QLDVDEMNYS SWVYFFTHFC HGNLLMDHLE  60
IKSGQDAPRL PARYDNVATI IAHWDPFPDL KTVRSMLTAE EMCLKARTPD TMSDSTSSSP  120
MVLLANTGNN PRRSSSSSEK VYKPCLNWSK GSCCFGASCK FLHNGTHCST