PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001884.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 354aa MW: 40439.3 Da PI: 7.101

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001884.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.8	1.3e-36	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+ye+++d+ +++++sws++g+sfvv+d+ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k++ ++ weF++++F +g Cse_sc001884.1_g090.1 15 FLTKTYEMVDDPLTDHIVSWSHTGTSFVVWDPPQFASELLPKYFKHNNFSSFVRQLNTYGFRKIDPDQ---------WEFANDEFIRG 93 9**************************************************************999.........******* PP XXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkk 101 +++ll++i+r+k Cse_sc001884.1_g090.1 94 QRHLLKNIHRRK 105 ********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MMDGSQGGSN SSPPFLTKTY EMVDDPLTDH IVSWSHTGTS FVVWDPPQFA SELLPKYFKH 60 NNFSSFVRQL NTYGFRKIDP DQWEFANDEF IRGQRHLLKN IHRRKPIHSH STPPQGTSST 120 ALSPSERQEY ENDIKKLKNE TGSLRLQLQN HKRENQENET KLTSLNERLH SIKLKQRKMI 180 SFLAQLLEKP KISLETNSKK RRLMISTYLQ DEANADENDN LDIHKLITKL DSKLKFWADF 240 VDDVKTSGQE KYDLPDSPTV SLIYTNQDSR VKTKSSGIDV NAEPVAAADV APVKTGANDV 300 FWEQFLTETP GGGDTQEVQS ERRDVIKSLW SMNNLDKITE KMGNLSPSGK LDVR

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MMDGSQGGSN SSPPFLTKTY EMVDDPLTDH IVSWSHTGTS FVVWDPPQFA SELLPKYFKH  60
NNFSSFVRQL NTYGFRKIDP DQWEFANDEF IRGQRHLLKN IHRRKPIHSH STPPQGTSST  120
ALSPSERQEY ENDIKKLKNE TGSLRLQLQN HKRENQENET KLTSLNERLH SIKLKQRKMI  180
SFLAQLLEKP KISLETNSKK RRLMISTYLQ DEANADENDN LDIHKLITKL DSKLKFWADF  240
VDDVKTSGQE KYDLPDSPTV SLIYTNQDSR VKTKSSGIDV NAEPVAAADV APVKTGANDV  300
FWEQFLTETP GGGDTQEVQS ERRDVIKSLW SMNNLDKITE KMGNLSPSGK LDVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	7e-83	HSF family protein