PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001894.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 176aa    MW: 20205.1 Da    PI: 6.9529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001894.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.2e-09349553
                           HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
                    HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                           h e+Er+RR+++ +  + LrellP  +   ++  s ++   +A +YIk+
  Cse_sc001894.1_g020.1  3 HREIERQRRQDMAKLHASLRELLPMEF--VKGNRSISDHMHQAAHYIKQ 49
                           99***********************65..9999***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MLHREIERQR RQDMAKLHAS LRELLPMEFV KGNRSISDHM HQAAHYIKQT EENVNQLGMR  60
RDQLKNSLDT IGSSMNHLFN TVSVNYCNGG VEILINSCTI EDGFHLSRVL NALVEEGLNV  120
TRCTSTKVND RLLHSIQSEV PYYDLQQIIA IDLALIDLSM LQQKLVFVSN TRPNFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-31bHLH family protein