PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001895.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 253aa MW: 28290.9 Da PI: 6.4377

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001895.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77	4.5e-24	11	154	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.. 77 p G +F+P+d el+ e+L++k+ + ++++ i+++d i++++P++Lp ++++ ++ + F k++ +y +g+rk+r+ Cse_sc001895.1_g030.1 11 PIGTKFDPSDVELL-EHLAAKCGVGNeephvyIDVF--IPTIDvdegICYTHPENLP-GARKDGNSFHLFYKTKYAYGKGQRKRRKih 94 89**********.999999876665665443333..5555444559*****.555678899**************856 PP NAM 78 .....tksgy.Wkatgkdkevlsk.kgelvglkktLvfykg.rapkg.ektdWvmheyrl 128 +++ y W++tg+++ +++k l g kk++v+y+ + +g +k dWvmhey+l Cse_sc001895.1_g030.1 95 hetssASNVYrWHKTGRTNLIINKeAPLLSGYKKIFVLYETiTGVSGrHKLDWVMHEYHL 154 76555234446******997344459*****643333331699*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MKVSDEWPGF PIGTKFDPSD VELLEHLAAK CGVGNEEPHV YIDVFIPTID VDEGICYTHP 60 ENLPGARKDG NSFHLFYKTK YAYGKGQRKR RKIHHETSSA SNVYRWHKTG RTNLIINKEA 120 PLLSGYKKIF VLYETITGVS GRHKLDWVMH EYHLGSVKYE KEGELVVSKI FHRLTSLETP 180 IQAEAQSDDN VNLNDAAEAA GSNAILNSSI RQDNVKSSVD TNYAAEAIIY PTIETADLAV 240 ISLAILITKS LET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	6e-52	NAC family protein