PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001905.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 245aa    MW: 27966.5 Da    PI: 5.6716
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001905.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.7e-08189242246
                            SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 
                              WT+eE++ l+++v+++ +       Wk+I           Rt+ ++k++w+k
  Cse_sc001905.1_g060.1 189 VFWTEEEEDMLKEGVQKFSSAtrknlPWKKILDFGRhvfdPYRTPSDLKDKWRK 242
                            67*****************99***********9988999*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDWTENQQCV LCDEGGNLLV CSGDGCPISV HQSCMGCEAH LDDAGNFHCP YCLYKQITTE  60
ARQLKEKVML TKKALSTFLE EETTNGKEDE ISSKDKSADD INLVGDDVQN HCEETSDTLV  120
PEQSNDNTCR VMVVYIKDKM KADQLESDVS KRIKVDNRRE NAKCKIEVAG QQQHSTSLTL  180
PSRNGKHRVF WTEEEEDMLK EGVQKFSSAT RKNLPWKKIL DFGRHVFDPY RTPSDLKDKW  240
RKIAK