PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001927.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 404aa MW: 47416.7 Da PI: 8.6822

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001927.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.6	5.4e-15	42	109	28	90
FAR1 28 itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 ++ r+f C ++gk+e++ + +k++r+r +tr++Cka +++k+++ +++w+vtk+++eHnH l Cse_sc001927.1_g060.1 42 MKGRDFFCHRQGKPETKVVDYSKQQRNRGSTRCECKAYMRIKLKRineifSEEWQVTKFVKEHNHVLL 109 66799*************9*****************9988777889***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
LIEENIVDEN INEKVNIDEP FVGQCFLSEE EAFVFYMKYA RMKGRDFFCH RQGKPETKVV 60 DYSKQQRNRG STRCECKAYM RIKLKRINEI FSEEWQVTKF VKEHNHVLLS TQEVRFLPSY 120 RNIANEDEKR ILLLKEGGLS VRQIMRVMEL EKNVRHGELP FLVDLAIEDV EQRQMHDTML 180 EKYRGSCLRS LSPIEEQGHY FLTSFAFKKF QEEFGKAIQY TVQEENCINF VVKHHKASRL 240 HKVFWDGKVA KCSCKKFEFV GIFCRHILSV FIHKDYFEVP STYWPSRWRR DELQLGETSP 300 SPQEGSIVDL TCLNDTIDLV ECPPMSNPKG RPKKIRPKGG IELITQVRRC GICKGVVSFR 360 GGLASKQTLF LNLHKIQNVV WITTSKQPFE KSFKFTESPY EDKP

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

LIEENIVDEN INEKVNIDEP FVGQCFLSEE EAFVFYMKYA RMKGRDFFCH RQGKPETKVV  60
DYSKQQRNRG STRCECKAYM RIKLKRINEI FSEEWQVTKF VKEHNHVLLS TQEVRFLPSY  120
RNIANEDEKR ILLLKEGGLS VRQIMRVMEL EKNVRHGELP FLVDLAIEDV EQRQMHDTML  180
EKYRGSCLRS LSPIEEQGHY FLTSFAFKKF QEEFGKAIQY TVQEENCINF VVKHHKASRL  240
HKVFWDGKVA KCSCKKFEFV GIFCRHILSV FIHKDYFEVP STYWPSRWRR DELQLGETSP  300
SPQEGSIVDL TCLNDTIDLV ECPPMSNPKG RPKKIRPKGG IELITQVRRC GICKGVVSFR  360
GGLASKQTLF LNLHKIQNVV WITTSKQPFE KSFKFTESPY EDKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-36	FAR1 family protein