PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001994.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 183aa MW: 20907.8 Da PI: 6.8024

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001994.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.7	1.2e-35	11	101	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+y +++d+ ++++isw+eng++fvv+ ++efa+ +Lp++Fkh+nf+SF+RQLn+YgF+k++ ++ weF+h++F+kg Cse_sc001994.1_g030.1 11 FLSKTYFLVDDPVTDKIISWNENGDAFVVWRPTEFAEVLLPTFFKHNNFSSFIRQLNKYGFRKIEPDR---------WEFAHNYFRKG 89 9***************************************************************99.........******* PP XXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkk 101 +k+ll++i+r+k Cse_sc001994.1_g030.1 90 EKSLLKEIQRRK 101 ********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MALEKMVLMP FLSKTYFLVD DPVTDKIISW NENGDAFVVW RPTEFAEVLL PTFFKHNNFS 60 SFIRQLNKYG FRKIEPDRWE FAHNYFRKGE KSLLKEIQRR KMPVVPTTPP ETPATTSVSP 120 FAAVPMSTSS AGNSSEELGV SSNSSPIAIT KTDLLEENKQ LKEQNANMRC ELDHLISRDG 180 STW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	1e-46	HSF family protein