PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002016.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 375aa    MW: 42860.3 Da    PI: 9.1174
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002016.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.73.7e-08621371188
                   FAR1  11 GFsvrks..kskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                            G+ ++++  ++ k+k +  + +  ++C ++g +++++++     ++r++++t+C  +l+ k +k ++ w++  + ++HnHe
  Cse_sc002016.1_g010.1  62 GYVIVTKrsSQDKTKLSSFVSEVVLMCDRSGIHRSTSST-----TNRTTKKTNCPFQLVGKYRKmHNYWMLRVICEKHNHE 137
                            6655554005556688889999***********998888.....9999****************99**************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MNKSMDIEDE TNSQYNTNFT QTVCENERTH AVNGTSEFST NMVFRSYQDL KHWVQKRGCS  60
LGYVIVTKRS SQDKTKLSSF VSEVVLMCDR SGIHRSTSST TNRTTKKTNC PFQLVGKYRK  120
MHNYWMLRVI CEKHNHEPAL DMKGHPYAQR LSDNERRLVV DLSKKDVKPK EILLTLKEKN  180
PNNVSTLRTI YNALQKIRKT GHAGQMANGE ASVSLSPPYT SRTFDANQMK QTVDHTNPFA  240
VRNLVQGFDS AKHGSVTGQM PCFRTFPPLQ TDLMQNPVKE VSNANLVRDM FMFDNKRERE  300
FLIKQFLEGD YAVESRDKGK DVDCDLETNK KHDKHDYVGV QSNSDMEKNE SPDVNFDGFA  360
DNRKDIIAGL GSSKV