PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002029.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 701aa MW: 81325.8 Da PI: 7.6483

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002029.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.4e-18	69	177	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvk 69 +fY++Y+k++GF+v k ++k ++ ++ ++f Cs+eg++e ++ +ek++r+r + r+gC ak++++ Cse_sc002029.1_g010.1 69 NFYKDYGKRAGFDVIKGGHYKPNKGENPNLKWFLCSREGTNEGKEVVddsknvvsehsditidenvKEKKKRNRGSFRCGCLAKIRIR 156 6*************************************998876688999*********99999************** PP FAR1 70 kekdgkwevtkleleHnHela 90 k + + +ev+++++ nH+l+ Cse_sc002029.1_g010.1 157 KIEGNLYEVYTFVEGYNHPLV 177 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MDLYLAVDSR VTTAGMVETA SDVQVVRVKD HVGFYTCDDK GNRTWFPEID IGDKPVEGCK 60 FVSIDQAYNF YKDYGKRAGF DVIKGGHYKP NKGENPNLKW FLCSREGTNE GKEVVDDSKN 120 VVSEHSDITI DENVKEKKKR NRGSFRCGCL AKIRIRKIEG NLYEVYTFVE GYNHPLVAEK 180 YMIFMKSSRD LTYTKQHFLF QASNANFGPS TGFKLLKQKC GGFDRVGATV VDCKNQKKKI 240 NLLIGDDGKL VGLFWADEQA IKDYAIFGDI ISFDATFRSN KYKMVFVPFT GINHHNRCIT 300 FASGLLSDET VGAYKWLLDE FKNAFGKDPN VFITDQDPSM KIAIPECFPN TRHRLCMWHI 360 MQKLTTKILP VDFEREWECM INDFELDDNK WLKDMFGMRE RWIPAYLCDE PMAGLMRTTS 420 RSESENNFFG KWTSPHLTVV EFLSHYDTAI EYQRYIERKN DHHSRYRKPV LKTDLQLEKE 480 ASTFYTQTVF FDVQDEIYAS YSHCMSINIL QIDDAERYSI RDMQADNKIR HDSNFVVYQV 540 DLCKSEMEIK CSCKHYEAYG LLCQHAFYVL RMNNIKEFPR KYLNKRWLKN AKPFNSVVTK 600 VVAQSESSLQ SEVFDLYEIF ESTVDRLVHN MDKLKIFKDQ MEELLAKAKI DVPVVPKLNS 660 KDVLGSMLGV NEPKSHNIRN PYESSNKGTG VHSRWKSIVE V

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MDLYLAVDSR VTTAGMVETA SDVQVVRVKD HVGFYTCDDK GNRTWFPEID IGDKPVEGCK  60
FVSIDQAYNF YKDYGKRAGF DVIKGGHYKP NKGENPNLKW FLCSREGTNE GKEVVDDSKN  120
VVSEHSDITI DENVKEKKKR NRGSFRCGCL AKIRIRKIEG NLYEVYTFVE GYNHPLVAEK  180
YMIFMKSSRD LTYTKQHFLF QASNANFGPS TGFKLLKQKC GGFDRVGATV VDCKNQKKKI  240
NLLIGDDGKL VGLFWADEQA IKDYAIFGDI ISFDATFRSN KYKMVFVPFT GINHHNRCIT  300
FASGLLSDET VGAYKWLLDE FKNAFGKDPN VFITDQDPSM KIAIPECFPN TRHRLCMWHI  360
MQKLTTKILP VDFEREWECM INDFELDDNK WLKDMFGMRE RWIPAYLCDE PMAGLMRTTS  420
RSESENNFFG KWTSPHLTVV EFLSHYDTAI EYQRYIERKN DHHSRYRKPV LKTDLQLEKE  480
ASTFYTQTVF FDVQDEIYAS YSHCMSINIL QIDDAERYSI RDMQADNKIR HDSNFVVYQV  540
DLCKSEMEIK CSCKHYEAYG LLCQHAFYVL RMNNIKEFPR KYLNKRWLKN AKPFNSVVTK  600
VVAQSESSLQ SEVFDLYEIF ESTVDRLVHN MDKLKIFKDQ MEELLAKAKI DVPVVPKLNS  660
KDVLGSMLGV NEPKSHNIRN PYESSNKGTG VHSRWKSIVE V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-83	FAR1 family protein