PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002071.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 249aa    MW: 28099.8 Da    PI: 5.4473
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002071.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1162.3e-369992101
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+y++++d+ ++++isw+engn+fvv+++ efa+++Lpk+Fkh+nf+SF+RQLn+YgF+k+  ++         weF+h+ F+kg
  Cse_sc002071.1_g010.1   9 FLSKTYSLVDDPVTDDMISWNENGNAFVVWKPAEFARDLLPKFFKHNNFSSFIRQLNTYGFRKIVADR---------WEFSHDCFRKG 87 
                            9****************************************************************999.........*********** PP

                            XXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkk 101
                            +k+ll++i+r+k
  Cse_sc002071.1_g010.1  88 EKSLLKEIQRRK 99 
                            **********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MERTVPTPFL SKTYSLVDDP VTDDMISWNE NGNAFVVWKP AEFARDLLPK FFKHNNFSSF  60
IRQLNTYGFR KIVADRWEFS HDCFRKGEKS LLKEIQRRKI SIAPSTPPAT PATTSISPLV  120
DKPISTSAGN SSEELGVSSN SSPLAVTETD LLEENERLKE QNANMRCELD HLRSMCTSVV  180
MMMSNFMCNQ PQINIGEASV KRVEGSDSRP QAEDEMCPRL FGVSIGTKRA RTSLEDAVVD  240
EHRDNKMVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-66HSF family protein