PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002075.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 432aa MW: 46901.9 Da PI: 5.9403

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002075.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.2	2.5e-14	49	136	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf....erspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 +W++ e+ L++ +++ +l +++l+ + We v++ ++e+g+ ++s +qCk+k++nl+kryk +++++++ s+++s++++f++ Cse_sc002075.1_g010.1 49 EWSEVEISILLDSFTDKYLALDKTSLRWKEWEMVGEDVAEGGVegdkRKSVEQCKNKIDNLKKRYKVETKRMSE--SGDVSSWVWFKK 134 5***********************************999985553469***************99998..78999***** PP trihelix 85 le 86 ++ Cse_sc002075.1_g010.1 135 MD 136 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MTSSPPNGTP ATPTTTVSPT TTPTTGNSRP TKKSRHDDVT GPSRKEREEW SEVEISILLD 60 SFTDKYLALD KTSLRWKEWE MVGEDVAEGG VEGDKRKSVE QCKNKIDNLK KRYKVETKRM 120 SESGDVSSWV WFKKMDYVFG DSAYNVMSSA AKGEEGGENG GGGGEDVGDD VSLDSRPTRR 180 STRLITHTAP VSNKKRPVSS LKWKRVVFKV SGTALAGSSQ SIDPKVALQI AEEVAAASRC 240 GVQVAIIIGG RNFFCGDSWV SATDLDRPTA YQIGMMATVM NSILLQSALE KLGIQTRVQS 300 AFVMPEVAEP YNRLRAMRHL DKGRVVIFGG VGAGTGNPLF TTDTAAALRA TEINADAVIK 360 GTSEDGIYDK RNITLDKISY RDVVSNGCDS MDTMAIQFCE ENAIPVVIFN MLEVGNVSKA 420 LTGEQVGTLI DQ

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MTSSPPNGTP ATPTTTVSPT TTPTTGNSRP TKKSRHDDVT GPSRKEREEW SEVEISILLD  60
SFTDKYLALD KTSLRWKEWE MVGEDVAEGG VEGDKRKSVE QCKNKIDNLK KRYKVETKRM  120
SESGDVSSWV WFKKMDYVFG DSAYNVMSSA AKGEEGGENG GGGGEDVGDD VSLDSRPTRR  180
STRLITHTAP VSNKKRPVSS LKWKRVVFKV SGTALAGSSQ SIDPKVALQI AEEVAAASRC  240
GVQVAIIIGG RNFFCGDSWV SATDLDRPTA YQIGMMATVM NSILLQSALE KLGIQTRVQS  300
AFVMPEVAEP YNRLRAMRHL DKGRVVIFGG VGAGTGNPLF TTDTAAALRA TEINADAVIK  360
GTSEDGIYDK RNITLDKISY RDVVSNGCDS MDTMAIQFCE ENAIPVVIFN MLEVGNVSKA  420
LTGEQVGTLI DQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-137	Trihelix family protein