PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002106.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 264aa    MW: 30654.1 Da    PI: 7.8532
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002106.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.66e-131863348
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +W  eEd++l+ +++++G  +W+  +r  g+ R++k+c++rw +yl
  Cse_sc002106.1_g040.1 18 PWRVEEDQKLKSYINRYGIWNWSHMPRFAGLSRSGKSCRLRWMNYL 63
                           8*****************99************************97 PP
2Myb_DNA-binding513.4e-1669114148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE+e+++  + +lG++ W+tIa++++ gR+++++k++w+++l
  Cse_sc002106.1_g040.1  69 RGKFSKEEEEIILVSHSLLGNR-WSTIASRLP-GRSDNDIKNYWHSHL 114
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MRMKSPRRDM KKGIKKAPWR VEEDQKLKSY INRYGIWNWS HMPRFAGLSR SGKSCRLRWM  60
NYLRPNVKRG KFSKEEEEII LVSHSLLGNR WSTIASRLPG RSDNDIKNYW HSHLKKRASK  120
QNLVCEKTEQ NDISSSPTSE TKNVLSIQQP ADHMNDYFES SFTFEEHYSS SSCSGTTTEK  180
QFEFQDNYYD TGSPGTIDDL QCFWDQLCPV ENLELRSNHL DLFSSAYGLH DSNNDSISSC  240
SFYNSNNYIS SILSNPYGLD DGLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.17e-50MYB family protein