PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002110.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 355aa MW: 39593.2 Da PI: 9.0497

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002110.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.6	2e-20	162	211	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g Cse_sc002110.1_g040.1 162 KYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAARAYDEAALRFRG 211 8******.******93....36***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MWVLKVANSS GDHFHLRKNN NNNNDDEVPS SNLLDDMVSS EYSYSREMSA MVTALTHVVS 60 GQTSSFGVSS TTSISSPSFR TGASALAAGV FSSDSPSSTY SSSSSGSFAG HKRVRDQDET 120 PTPVNQQHPR LHRVKEEETP STNTVITAQQ NQHEESGERR RKYRGVRQRP WGKWAAEIRD 180 PQKAARVWLG TFETAEAAAR AYDEAALRFR GNRAKLNFPE NAVLLPAQQL LPITTTTTTS 240 ISQQPAVTSY YQIPNSIPPS SDYWQYTRLL QSSNNSNNGQ QPQANRLQQM YNASTMASLY 300 SQTSSNQYFH NQRPLHYSEY NPIEHNNEEN NVTNLHTIPP SRPPGSSQLR PPNNP

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MWVLKVANSS GDHFHLRKNN NNNNDDEVPS SNLLDDMVSS EYSYSREMSA MVTALTHVVS  60
GQTSSFGVSS TTSISSPSFR TGASALAAGV FSSDSPSSTY SSSSSGSFAG HKRVRDQDET  120
PTPVNQQHPR LHRVKEEETP STNTVITAQQ NQHEESGERR RKYRGVRQRP WGKWAAEIRD  180
PQKAARVWLG TFETAEAAAR AYDEAALRFR GNRAKLNFPE NAVLLPAQQL LPITTTTTTS  240
ISQQPAVTSY YQIPNSIPPS SDYWQYTRLL QSSNNSNNGQ QPQANRLQQM YNASTMASLY  300
SQTSSNQYFH NQRPLHYSEY NPIEHNNEEN NVTNLHTIPP SRPPGSSQLR PPNNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	163	ERRRKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50080.1	3e-26	ERF family protein