PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002123.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 215aa    MW: 24862.5 Da    PI: 10.1918
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002123.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.61.7e-0720107790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 
                            A++ GF ++k ++k+    g  ++ +f+Cs++g++++e+ + ++ +r++ + +++C  +l  k  k       ++ w +    l HnH
  Cse_sc002123.1_g060.1  20 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSRHGTSARESLE-DELERQTGTAKINCPFRLLAKFIKgrtgttkTSGWILRVKCLRHNH 104
                            8899*******98888..6667***************9999.8888889999*****9998775543323333556777777799*** PP

                   FAR1  88 ela 90 
                            +++
  Cse_sc002123.1_g060.1 105 DFV 107
                            986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MYKVVFRDEV VLTDWVQSTA QSNGFLIVKG RTKTDRGYKY SIEFKCSRHG TSARESLEDE  60
LERQTGTAKI NCPFRLLAKF IKGRTGTTKT SGWILRVKCL RHNHDFVDSF HGFSQAMRLK  120
ESELVLVEQL TKHQVAPQII LSSLKESDPN NVYSIKTIRG ASRGDLTPIQ LLLVHLRRKG  180
YTYYPRVNDH TNELEEIFLF TRRHMPCGQH SRKSC