PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002166.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 260aa    MW: 28496.8 Da    PI: 4.315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002166.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1960110155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + ++GVr++  +g+WvAeIr+p   + r kr +lg+f +a eAa+a+++a+++++g
  Cse_sc002166.1_g050.1  60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFASAVEAARAYDEAALAMYG 110
                            579****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDNLAKKQKR KRTEGPKIVA ETIAKWVKIN NDANNTRKAP AKGSTKGCMK GKGGPENSGC  60
SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FASAVEAARA YDEAALAMYG SSARINLPNY  120
CPDASLLCKT ASSYTQNVCQ ASASEVDVTG IGNDDGYCQG FPEDEMIDID ELLGLMDDQK  180
GESINEAESS GHPMYDAWFE NKLDDFGFDF METGPEECNF TLEEFGLSLD PAEPVITGPE  240
ECGFTLEEFG LSLDPAEPVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-34ERF family protein