PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002189.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 239aa    MW: 27664.4 Da    PI: 8.5886
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002189.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.11.6e-34281192102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl k+y +++d+++++++sw+++g+ fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg
  Cse_sc002189.1_g040.1  28 FLLKTYMLVDDPDTDHVVSWNSDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFCNERFHKG 106
                            9****************************************************************999.........*********** PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +k+ll++i+r+ks
  Cse_sc002189.1_g040.1 107 RKDLLCQIRRRKS 119
                            ***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MLMEKGGDRG CGDELMVDFV TKSSPSPFLL KTYMLVDDPD TDHVVSWNSD GTGFVVWQPA  60
EFARDLLPTL FKHSNFSSFV RQLNTYGFRK VATSRWEFCN ERFHKGRKDL LCQIRRRKSW  120
ANKPQMTQTL RESDEDQRSS STNSLSSGYN ILVDENQKLK KENKVLFSEL SSMKSKCKEL  180
IDLVCMCTSS PTKEEEEDKR PKLFGVRLEV QGDKERKRKR IEEVSESARR ILLSINANE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.18e-61HSF family protein