PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002239.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 153aa MW: 17025.6 Da PI: 10.0235

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002239.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00066	37	59	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k Fs+ L H +H Cse_sc002239.1_g060.1 37 FKCKTCNKKFSSFQALGGHRTSH 59 89**********99998888777 PP
2	zf-C2H2	11	0.0013	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H Cse_sc002239.1_g060.1 75 HECSICGLEFELGQALGGHMRKH 97 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MKRSWNDDRE IENLAMANCM MILNRVGRTN SDSSRVFKCK TCNKKFSSFQ ALGGHRTSHK 60 KPKSSEDIGA KVKTHECSIC GLEFELGQAL GGHMRKHRDS VAEKSVRAKV EVVPVVVDGA 120 TKGLFWDVDL NLTPFQNELK IWSRSSGMAG IAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59820.1	5e-34	C2H2 family protein