PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002349.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 273aa    MW: 31676.3 Da    PI: 7.7771
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002349.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1271.4e-081241674890
                   FAR1  48 tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                             +k++r+++++ t+C+ak+ +k    ++ ++++k++++HnH+l+
  Cse_sc002349.1_g010.1 124 VKKRKRRSTTQVTDCQAKISLKYLIgTNSYKIIKFVENHNHKLV 167
                            4566677778889*********9988****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVNIVDQEHV GSNDNQHQNE RVIVLSEDPI DIEDIKLDQD ANIDANEIDV YDIDPECIPS  60
PHGTKYYVPN IHDDEKPKKG RIFANFDKAL KAYTVHGKPR KPVETNTLIE VPNQLLKRVV  120
MEMVKKRKRR STTQVTDCQA KISLKYLIGT NSYKIIKFVE NHNHKLVDQS NMDLSKARRQ  180
LEFGDNMFIH DASLSNIGPQ KAHRLRVALL GGFDLVRGMP VDWNNFRRGM NLFIGERDAQ  240
MLVDKMLKRQ EHVHEFSFIH HTIKDELWCM LGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125130KKRKRR