PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002368.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 208aa    MW: 23842.6 Da    PI: 6.2241
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002368.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171571148
                           TSSS-HHHHHHHHHHHHHTTTT..........-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg..........tWktIartmgkgRtlkqcksrwqkyl 48
                           +g W+++Ed++l+d++  +G            tW+ Ia++++ gRt++++k++w+++l
  Cse_sc002368.1_g050.1 15 KGLWSPDEDQKLKDYIMNYGHScwssvpinagTWSQIAQHLP-GRTDNEIKNYWNSHL 71
                           678*****************99********************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRCKASEKLC PKHKKGLWSP DEDQKLKDYI MNYGHSCWSS VPINAGTWSQ IAQHLPGRTD  60
NEIKNYWNSH LKKRVEKLQH LQTNPKTDWS CLNASSFINS SSADLNQLVP PASQITTLPK  120
ILFADWISLD ELRKDIGKSR DQPFSHGSSY EVSHMHDYHE VSTQESKDSQ NCLISGSNNG  180
DMFQSYMTID EIFSFNDGDF NLDDCIYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.12e-26MYB family protein