PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002395.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 156aa MW: 17583.7 Da PI: 8.1178

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002395.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	39	60	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C++ F ++ L H++ H Cse_sc002395.1_g020.1 39 VCHFCNRKFYSPQALGGHQNAH 60 7******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MDTRDGMNKD TQKNEWLNLS LGQNKKEPCS ELRPVSLKVC HFCNRKFYSP QALGGHQNAH 60 KRERDAAKRY HSLMMPAHPF LIDRSMGVQP HSLVHKPTRN EETSAATFQN TSAEYGATLV 120 QSEEGAGLAW QGSSYFDPHL ASQLSDPFTL DLNLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	6e-16	C2H2 family protein