PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002395.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 406aa MW: 46326.5 Da PI: 6.1451

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002395.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.6e-56	20	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdee+v++yL++kv ++++++ +i evd++k+ePwdLp+k+k +ekew+fF++rd+ky+tg r+nrat+sgyWkatgk Cse_sc002395.1_g040.1 20 LPPGFRFHPTDEEIVTHYLTPKVVNRRFSA-CAIGEVDLNKCEPWDLPEKAKMGEKEWFFFCQRDRKYPTGMRTNRATDSGYWKATGK 106 79***********************999.67***********99999******************************* PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrle 129 dke+++k +g+lvg+kktLvfykgrapkgekt+Wvmhe+rle Cse_sc002395.1_g040.1 107 DKEIHKKgkSGKLVGMKKTLVFYKGRAPKGEKTNWVMHEFRLE 149 **9777888*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MEGGSSSMVV NEGDDALVGL PPGFRFHPTD EEIVTHYLTP KVVNRRFSAC AIGEVDLNKC 60 EPWDLPEKAK MGEKEWFFFC QRDRKYPTGM RTNRATDSGY WKATGKDKEI HKKGKSGKLV 120 GMKKTLVFYK GRAPKGEKTN WVMHEFRLEG DFSYYNMSRA SKDEWVVCRI VQKNNTEIKR 180 NLNADVGMSR MNSFVDELLD SPPWLPPLTD QPTPQFDPDR QGSSSTHLDR NKITNYHNEN 240 IGVQKFKGLV DHENYPSYFS HDQSQMLQEN QDYKNLFVSP YNYNFDTNSF QMTPFVSDHQ 300 SNFASTQNIS TNFPYLSSGS TRYMGQASGL EGEAEKNVGR CKVEPYVTTN TNQSSKISVT 360 SQDTGISCND MTTEISSASK HDMGMRQYDH LEDQPALSEF DSLLEY

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MEGGSSSMVV NEGDDALVGL PPGFRFHPTD EEIVTHYLTP KVVNRRFSAC AIGEVDLNKC  60
EPWDLPEKAK MGEKEWFFFC QRDRKYPTGM RTNRATDSGY WKATGKDKEI HKKGKSGKLV  120
GMKKTLVFYK GRAPKGEKTN WVMHEFRLEG DFSYYNMSRA SKDEWVVCRI VQKNNTEIKR  180
NLNADVGMSR MNSFVDELLD SPPWLPPLTD QPTPQFDPDR QGSSSTHLDR NKITNYHNEN  240
IGVQKFKGLV DHENYPSYFS HDQSQMLQEN QDYKNLFVSP YNYNFDTNSF QMTPFVSDHQ  300
SNFASTQNIS TNFPYLSSGS TRYMGQASGL EGEAEKNVGR CKVEPYVTTN TNQSSKISVT  360
SQDTGISCND MTTEISSASK HDMGMRQYDH LEDQPALSEF DSLLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	3e-98	NAC family protein