PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002406.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 246aa    MW: 27616 Da    PI: 7.9339
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002406.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.2e-175199255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                            +kGVr++  +grWv+eIrd      +  r +lg+f +a eAa+a++ a+++++g
  Cse_sc002406.1_g060.1 51 TFKGVRQRT-WGRWVSEIRDN-----HgSRQWLGTFNSAHEAAQAYDSAARRIFG 99
                           69****999.**********3.....35************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSSVLNARNN GGGRDGNDGE KRKVNKKRAA HASPRKGCMK GKGGPLNASC TFKGVRQRTW  60
GRWVSEIRDN HGSRQWLGTF NSAHEAAQAY DSAARRIFGA NACFNLPTSE VATQPSASRR  120
AVATAVARCH QQLFLENQIK QEIEKHNQKQ KEMEIEMYKN MINPQQDQVT NNHIEKPVKT  180
VVEERISFAS TFNKLNENLP EFDDTEMWEE AASIMDFHTE AMCDPGIAAY DFGDAMGIEL  240
NHPLMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-37ERF family protein