PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002409.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 150aa    MW: 16549.1 Da    PI: 10.6561
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002409.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.45.4e-201952134
                   GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                           C+ C+t kTplWR gp g+k+LCnaCG++++kkg
  Cse_sc002409.1_g040.1 19 CTDCNTAKTPLWRAGPAGPKSLCNACGIRFKKKG 52
                           ********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MESSSMNCEE TSTKTDKVCT DCNTAKTPLW RAGPAGPKSL CNACGIRFKK KGPRQPSPPS  60
SSSSTTVGSR SRSDACDEET KDGKFRKKLR IKLLALGKEV VLIQRPRSPM KKVVRKQIRN  120
IRFQNQYKNL GEVEQAAHLL MSLSCGSVFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-21GATA family protein