PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002488.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 285aa    MW: 31372.7 Da    PI: 8.6534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002488.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-203282256
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           ++ GVr+++ +grWvAeI+d s   ++ r +lg+++t+eeAa+a+++a+++l+ge
  Cse_sc002488.1_g050.1 32 KFVGVRQRP-SGRWVAEIKDSS---QKVRLWLGTYDTPEEAARAYDEAARALRGE 82
                           799******.7*********42...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MASFETTNTT TTTATSITTK TTTKATKPMM RKFVGVRQRP SGRWVAEIKD SSQKVRLWLG  60
TYDTPEEAAR AYDEAARALR GENARTNFAP IVNCNPSQIN SISGSMSESD KRRALSFSSL  120
KARLSKNLQS IMARTNENKS SPKSRVSDHF TFASIFNFKG NYQYQNNVVG DMEKVVQPSV  180
IVPSQTLADD HEVASATTYN SSWEASSVSD CSNEWASFAT RHHGLDSDGS DIGEGSYLGD  240
QMIGEWISSP DISDGGSRSK RFKVSSSVLV PPKFSDQTNE SPFPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-17ERF family protein