PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002509.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 197aa MW: 22032.6 Da PI: 6.9559

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002509.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.3e-06	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ +++ e+ +C ++ lC C H+ Cse_sc002509.1_g030.1 4 QCDVCHKSEAVVYCAADEASLCSACDYRVHHA 35 7****99***************999744 PP
2	zf-B_box	28	4.6e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++e ++ lfC++++ lC++C +H+ Ht Cse_sc002509.1_g030.1 55 SPRCDICQERRAFLFCKEDRAILCRECDIPIHQAneHT 92 689*****************************767854 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MKIQCDVCHK SEAVVYCAAD EASLCSACDY RVHHANKLAN KHPRFSLVNP SFKDSPRCDI 60 CQERRAFLFC KEDRAILCRE CDIPIHQANE HTQKHTRFLL TGVKLSTSLT CYDNSFHQTP 120 SSSNSNGSTA ESTKGPRGRK GGTVDKNSSS SVSQEESGFM EASNISEYLM ETLPGWHVDE 180 FLDPYGYCKF SIAFLNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	5e-60	DBB family protein