PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002530.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 218aa    MW: 22430 Da    PI: 8.5008
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002530.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.49e-074262425
                           ---SGGGGTS--TTTTT-SS-S CS
                zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                           ++C++f++ G+C+ G++C+F H
  Cse_sc002530.1_g010.1 42 KPCNNFLK-GFCRSGASCRFLH 62
                           69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MRQKARVQDP LSDSTPSSPM VLLADTGSNT RRSSSSTDKV HKPCNNFLKG FCRSGASCRF  60
LHNGVHGSSP CPPSSSPSTL SPSDLQTLQH LLAKLGCNGT SNINQLSAPN SPASVAFYTS  120
PPGFGSSTMI SGPSATNPSV NPATYGLTGH YPAVHYSGIL GPASVQQLNA PLTPTPNTSS  180
QPFVPEPPTS PLPEPPTSPI HASPPSPSVA SPDILPSP