PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002531.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 141aa    MW: 15830.3 Da    PI: 4.8898
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002531.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.23.2e-212374256
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           +y+GVr ++ +g+++AeIrd ++ng  +r++lg+f taeeAa+a+++a+ +++g+
  Cse_sc002531.1_g050.1 23 KYRGVRKRP-WGKYAAEIRDTNNNG--ARVWLGTFATAEEAARAYDRAAYEMRGH 74
                           8********.**********65565..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MERGGGRSKD RQKDSEGEAD EVKYRGVRKR PWGKYAAEIR DTNNNGARVW LGTFATAEEA  60
ARAYDRAAYE MRGHMAVLNF PNEYPPTFSA ADYNAFNIAA TSSAGESSSS GVQGREVIEF  120
EYLDDKLLED LLDYDNQKTK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-23ERF family protein