PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002540.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 103aa    MW: 12236.3 Da    PI: 10.3797
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002540.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK57.33e-18450652
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           s e++s+yF++p+++ Ak  +v+l+v K  CR  GI+ WP+Rk+ sl
  Cse_sc002540.1_g020.1  4 SREVISHYFHMPLHQTAKYFNVGLSVFKVHCRSVGIQCWPYRKLLSL 50
                           789****************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MSFSREVISH YFHMPLHQTA KYFNVGLSVF KVHCRSVGIQ CWPYRKLLSL ERLINCFQGK  60
GGDSKTNEKM QEIITKLQEE KRRIEENPEL PITKNTKKLR QRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.12e-23Nin-like family protein