PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002542.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 907aa MW: 99503.9 Da PI: 8.6553

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002542.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.5	2.7e-14	239	338	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kvlt +d++ks++lvlpk++ae+ +++ ees++++ +d++g+ W++k++ ++k+++yvl + +a +L gD+v+F++ Cse_sc002542.1_g050.1 239 FEKVLTAADTGKSRWLVLPKNCAEKLfpSINDEESTQVVCQDTQGEDWRFKFRTspKNKGRMYVLD-EFYLYLQAMELSLGDTVTFSR 325 99*******************99988889999**************88877777778888.8999**************6 PP -SSSEE..EEEEE- CS B3 85 dgrsefelvvkvfr 98 + +++lv++ ++ Cse_sc002542.1_g050.1 326 LD-PQRNLVIGYRK 338 65.77778887766 PP

Sequence ? help Back to Top
Protein Sequence Length: 907 aa Download sequence
MFQNHKSDSE ETNDDATITR TPRANGDTTI TSTPCVNNTT NSPTTRANDN TITPTPRANG 60 DTITPTPHAI DDTTITPTPH AIDDTTITET PHVIDVTTII ATLRANDDTT ITPTPCVNDD 120 TIVTPTTRAN HDTTTITPNP RAIHDTTTIT ATPLALEHNA SETSSKTPAS AQTREEKRQT 180 GRGREKNVSY RYVPRMTNLQ VEEIKRGCIG KNSQIVIGLG EEEIQEVPEE PKVILIPLFE 240 KVLTAADTGK SRWLVLPKNC AEKLFPSIND EESTQVVCQD TQGEDWRFKF RTSPKNKGRM 300 YVLDEFYLYL QAMELSLGDT VTFSRLDPQR NLVIGYRKNS PESSSNHLPR GAIASMSRVR 360 DTRLNNVDGE KGKNKSAMPS MVSQGELNAF PRVESDLVAP QVPLFARKKS VEVGSTSNSS 420 RKKHKLSEVD TPNEAQEHVS SDHGGNDPFA AVANGVKIKS KKVAKGKPDA SASGQSDIVA 480 TNVPVSAKRK HFEVGSTSQR KKQKRKPSEV DVIATEVQEP VPSPCCRNGT FELVVNGVKM 540 KTTKKFECMV REILNKQGHL VTGNQNATSP SLASQDKAET STRKQKSKGK NSLPTLANIC 600 KGKAIDSISA PPNMVPAEPP VRAKGKHIEI GSTSRSADRK RKISAFDPTL KESTEPRAPP 660 SSKKTKTRNL EPEPQATVEA RVAPEPSNVT KKHPRHRTGC QCIICIQPPS GSKHSSTCPC 720 PSCIAKRLRV KNMKEKASQK PSIRRQRKVP EPAEPSNHQI ARVSRGSDEN QVERREPSPS 780 AEPSNHQTIT VSSGSEENQN EGRELSQSAE LSNQQTITVS SGLEENLQNE RIIEPPQSAK 840 HSNVQTKTIT VNRDSEENQN EQSLTGSHSN NTIRPLFDLN LPASDDDEDF VDPTRQYTNG 900 YGGYISE

Sequence ? help Back to Top

Protein Sequence Length: 907 aa Download sequence

MFQNHKSDSE ETNDDATITR TPRANGDTTI TSTPCVNNTT NSPTTRANDN TITPTPRANG  60
DTITPTPHAI DDTTITPTPH AIDDTTITET PHVIDVTTII ATLRANDDTT ITPTPCVNDD  120
TIVTPTTRAN HDTTTITPNP RAIHDTTTIT ATPLALEHNA SETSSKTPAS AQTREEKRQT  180
GRGREKNVSY RYVPRMTNLQ VEEIKRGCIG KNSQIVIGLG EEEIQEVPEE PKVILIPLFE  240
KVLTAADTGK SRWLVLPKNC AEKLFPSIND EESTQVVCQD TQGEDWRFKF RTSPKNKGRM  300
YVLDEFYLYL QAMELSLGDT VTFSRLDPQR NLVIGYRKNS PESSSNHLPR GAIASMSRVR  360
DTRLNNVDGE KGKNKSAMPS MVSQGELNAF PRVESDLVAP QVPLFARKKS VEVGSTSNSS  420
RKKHKLSEVD TPNEAQEHVS SDHGGNDPFA AVANGVKIKS KKVAKGKPDA SASGQSDIVA  480
TNVPVSAKRK HFEVGSTSQR KKQKRKPSEV DVIATEVQEP VPSPCCRNGT FELVVNGVKM  540
KTTKKFECMV REILNKQGHL VTGNQNATSP SLASQDKAET STRKQKSKGK NSLPTLANIC  600
KGKAIDSISA PPNMVPAEPP VRAKGKHIEI GSTSRSADRK RKISAFDPTL KESTEPRAPP  660
SSKKTKTRNL EPEPQATVEA RVAPEPSNVT KKHPRHRTGC QCIICIQPPS GSKHSSTCPC  720
PSCIAKRLRV KNMKEKASQK PSIRRQRKVP EPAEPSNHQI ARVSRGSDEN QVERREPSPS  780
AEPSNHQTIT VSSGSEENQN EGRELSQSAE LSNQQTITVS SGLEENLQNE RIIEPPQSAK  840
HSNVQTKTIT VNRDSEENQN EQSLTGSHSN NTIRPLFDLN LPASDDDEDF VDPTRQYTNG  900
YGGYISE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	639	666	RKRKISAFDPTLKESTEPRAPPSSKKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21550.1	1e-28	B3 family protein