PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc002551.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family E2F/DP
Protein Properties Length: 213aa    MW: 24385.3 Da    PI: 10.0194
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc002551.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP36.58.2e-1212493971
                E2F_TDP 39 vknkrRRiYDilNVLealnliek.....kekneirwkg 71
                            k+k+RR+YDi+NV+++++l+ek     + k+++rw g
  Cse_sc002551.1_g040.1 12 RKTKVRRLYDIANVFQSMDLLEKirhpeNGKPAFRWLG 49
                           589************************999******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MRNNFLSYCP SRKTKVRRLY DIANVFQSMD LLEKIRHPEN GKPAFRWLGV KGHPNTKSLA  60
LDTSNSKKRA FGTDITNHTD SKRYRMDSSS DWSSKGVTVA MHRNSDCMKF EYDENNTMLQ  120
QPQRNSKEFV FGPFTPATAH RAGASGNKRL TQTQDWENLA DTYRPQYRNK GTFVNLSGGK  180
SGGLALNDVF GHYVEAWKSW YVEADEKEVQ LVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01330.12e-32E2F/DP family protein