PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002583.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 349aa MW: 39928.6 Da PI: 8.7871

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002583.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.6e-55	21	147	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeel+++yL +kv ++++ + ++i evd++++ePw+Lp+ +k +ekewyfF+ rdkky+tg r+nrat+ gyWkatgk Cse_sc002583.1_g050.1 21 LPPGFRFHPTDEELITHYLSNKVVDNNFCA-KAIGEVDMNRIEPWELPRLAKMGEKEWYFFCVRDKKYPTGMRTNRATAGGYWKATGK 107 79***********************998.88***********8888899***************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dk++++ ++ lvg+kktLvfykgrapkgekt+Wv+heyrle Cse_sc002583.1_g050.1 108 DKDIFR-RKLLVGMKKTLVFYKGRAPKGEKTNWVIHEYRLE 147 **.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MTESFNQSGL VKKDDQMDLQ LPPGFRFHPT DEELITHYLS NKVVDNNFCA KAIGEVDMNR 60 IEPWELPRLA KMGEKEWYFF CVRDKKYPTG MRTNRATAGG YWKATGKDKD IFRRKLLVGM 120 KKTLVFYKGR APKGEKTNWV IHEYRLEGKS SQQLPTSAKN EWVIIRVFHK NSGGTKVHIP 180 GLMKMNSGDN ELIPASLPSL IDSPVVAYGE KRLKPITPDP INVPCFSNPI NIQQKDMFNT 240 FLNNPNYTFN AISAGQYVNH MKGNFHPQSF PFRGNDQAIL RGLIENYGQN MKVEREMVTC 300 SQDTGLSTEM NNEIESVMSN LEMVKRKFED QEIASTSMGA IDMDSLWNY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MTESFNQSGL VKKDDQMDLQ LPPGFRFHPT DEELITHYLS NKVVDNNFCA KAIGEVDMNR  60
IEPWELPRLA KMGEKEWYFF CVRDKKYPTG MRTNRATAGG YWKATGKDKD IFRRKLLVGM  120
KKTLVFYKGR APKGEKTNWV IHEYRLEGKS SQQLPTSAKN EWVIIRVFHK NSGGTKVHIP  180
GLMKMNSGDN ELIPASLPSL IDSPVVAYGE KRLKPITPDP INVPCFSNPI NIQQKDMFNT  240
FLNNPNYTFN AISAGQYVNH MKGNFHPQSF PFRGNDQAIL RGLIENYGQN MKVEREMVTC  300
SQDTGLSTEM NNEIESVMSN LEMVKRKFED QEIASTSMGA IDMDSLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-124	NAC family protein